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Upon successful completion of this course students will be able to:
1. Outline the history of major microbiological discoveries and describe their contributions to world civilization.
2. State Koch's postulates and apply them to different types of pathogen and to new diseases.
3. Relate basic principles of chemistry and cell biology to structure and function of microbes.
4. Explain how the unity of basic cell processes contributes to difficulties in treating infectious disease.
5. Describe the principles and mechanisms of microbial genetics and coevolution and apply them to the problem of increasing drug resistance in microorganisms.
6. Describe viruses and their relation to cells.
7. Compare and evaluate the various mechanisms of control and prevention of microbial disease.
8. Discuss the mechanisms of pathogenicity in microbes.
9. Compare and contrast the epidemiology of community acquired and hospital acquired infections.
10. Describe the functions of the human immune system, its relations to disease, and how vaccination contributes to immunity.
11. Describe the etiology, epidemiology, treatment and prevention of a variety of important infectious diseases.
12. Safely and aseptically perform a variety of microbiological laboratory techniques.
13. Collect and analyze data.
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I. Historical development
A. The pre-microbial world
B. Discovery of the microbial world and development of the microscope
C. Spontaneous generation
D. Koch's postulates
E. Contribution of biochemistry and molecular biology to
microbiology
F. Contribution of microbiology to world civilization
II. Cell biology
A. Chemistry and biochemistry review
B. Lipids, membranes and cells
C. DNA, RNA, protein: structure and function
D. ATP synthesis and cell work
E. The eukaryotic cell: structure and function; endosymbiotic theory
F. The prokaryotic cell: structure and function
G. Comparioson of bacteria and archaea
III. Methodology
A. Steps of the scientific method and Koch's postulates
B. Methods of sterilization and disinfection
C. Media and their construction and utilization
D. Methods of obtaining pure cultures
E. Staining and microscopy
F. Antibiotic sensitivity tests
G. Enrichment culture
H. Fermentation: theory and practice
I. Transformation
J. Polymerase chain reaction and gel electrophoresis
K. Enzyme linked immunosorbent assay (ELISA)
L. Collection and analysis of environmental samples
IV. Antimicrobial agents
A. Sterilization, disinfectants, antiseptics
B. Antibiotics
1. mode of action
2. resistance mechanisms
V. Microbial genetics
A. Genome and phenotype
B. Mutation, selection, adaptation
C. Horizontal gene transfer
1. transformation
2. conjugation
3. transduction
D. Relation to virulence and antibiotic resistance
VI. Virus
A. Definitions and historical background
B. Interactions with cells
C. Viral disease
1. vaccination, treatment and prevention
2. polio, rabies and HPV
3. HIV/AIDS
4. H5N1 Avian Influenza
VII. Ecological principles
A. The human as ecosystem
B. Symbiosis
C. Impact on model of infectious disease
VIII. Infectious disease
A. Role of normal flora
B. Mechanisms of pathogenicity
C. Epidemiology
1. community-acquired infections
2. hospital-acquired infections
D. Role of the host in disease
1. innate resistance
2. aquired resistance
3. factors influencing host resistance
E. Vaccination, prevention and treatment
F. Specific diseases of the human population
1. bacterial
2. viral
3. fungal
4. protozoal
5. comparison of common diseases and practices in the developed world versus the developing world
IX. Applied microbiology
A. Modern biotechnology
B. Environmental microbiology
1. wastewater treatment
2. antibiotic isolation
3. environmental sampling and analysis
C. The role of hospital and public health laboratories
D. Fermentation applications in the food and chemical industries
Laboratory Exercises
I. Laboratory safety and sanitation
II. Laboratory Techniques
A. Aseptic technique
B. Bacterial culture (liquid and solid medium)
C. Microscopy and staining techniques
D. Preparation and sterilization techniques
E. Analyses of bacteria in water, soil, and the community at large
F. Antibiotic sensitivity
G. Metabolic tests and bacterial identification
H. Bacterial mutagenesis
I. Transformation
J. Polymerase chain reaction and gel electrophoresis
K. ELISA
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Microbiology: An Introduction, 10th edition, by G.J. Tortora, B.R. Funke
and C.L. Case, 2010
Microbiology: A Systems Approach, 3rd edition, , M.K. Cowan, K.P. Talaro, 2012
Microbiology: A Photographic Atlas for the Laboratory, S.K. Alexander and D. Strete, 2001 (Classic)
Instructor prepared lab manual